Protein ZmOrphan304
ZmOrphan304 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan304
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym): PRH8
Uniprot ID: B4FW20
Subgenome: 1

Protein ZmOrphan304

ZmOrphan304 is a protein in the Orphans family.

Overview of domains present in v5 transcripts
PF00481
Zm00001eb158020_T001
Zm00001eb158020_T002
Zm00001eb158020_T003
Zm00001eb158020_T004

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d044015DAPseq no logo sequence fimo position
Zm00001d044015DAPseq no logo sequence fimo position
Zm00001d044015ChIPseq no logo sequence fimo position
Zm00001d044015PChIPseq no logo sequence fimo position

Interactions where ZmOrphan304 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan304 is the target  
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There are 135 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb158020_T001 from maize genome v5

Amino Acid Sequence
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MSSSEASTQDHGVPALEAQDSTDDHGVPALEAPTPEATDKVLAAMARLARRRRLELRRLGRTAPVGAEGEVAMRVRPVSG
TSADTSRESAKVAPEPHEGASAVAGWPKPVSHGAVSVIGRRREMEDAVAVAVPFLVAAAGEEGDGGGEKEAEMEFFAVYD
GHGGSRVADACRERLHVVLAEEVARLHLVKGGDGARWREVMEACFARVDGEVAVVEGEVNNAGHTVGSTAVVAVVGPRHI
VVANCGDSRAVLSRGGVPVPLSSDHKPDRPDELERVESAGGRVINWKGYRVLGVLATSRSIGDYYMKPFISAEPEVTVTE
RTHKDEFIILGSDGLWDVMSNEVACKVARNCLCGRAASKYPETVHGSSASDAAAVLVEFAMARGSTDNISVVVVELKRLK
WKGGRQNGRT

MSSSEASTQDHGVPALEAQDSTDDHGVPALEAPTPEATDKVLAAMARLARRRRLELRRLGRTAPVGAEGEVAMRVRPVSG
TSADTSRESAKVAPEPHEGASAVAGWPKPVSHGAVSVIGRRREMEDAVAVAVPFLVAAAGEEGDGGGEKEAEMEFFAVYD
GHGGSRVADACRERLHVVLAEEVARLHLVKGGDGARWREVMEACFARVDGEVAVVEGEVNNAGHTVGSTAVVAVVGPRHI
VVANCGDSRAVLSRGGVPVPLSSDHKPDRPDELERVESAGGRVINWKGYRVLGVLATSRSIGDYYMKPFISAEPEVTVTE
RTHKDEFIILGSDGLWDVMSNEVACKVARNCLCGRAASKYPETVHGSSASDAAAVLVEFAMARGSTDNISVVVVELKRLK
WKGGRQNGRT

MSSSEASTQDHGVPALEAQDSTDDHGVPALEAPTPEATDKVLAAMARLARRRRLELRRLGRTAPVGAEGEVAMRVRPVSG
TSADTSRESAKVAPEPHEGASAVAGWPKPVSHGAVSVIGRRREMEDAVAVAVPFLVAAAGEEGDGGGEKEAEMEFFAVYD
GHGGSRVADACRERLHVVLAEEVARLHLVKGGDGARWREVMEACFARVDGEVAVVEGEVNNAGHTVGSTAVVAVVGPRHI
VVANCGDSRAVLSRGGVPVPLSSDHKPDRPDELERVESAGGRVINWKGYRVLGVLATSRSIGDYYMKPFISAEPEVTVTE
RTHKDEFIILGSDGLWDVMSNEVACKVARNCLCGRAASKYPETVHGSSASDAAAVLVEFAMARGSTDNISVVVVELKRLK
WKGGRQNGRT

MSSSEASTQDHGVPALEAQDSTDDHGVPALEAPTPEATDKVLAAMARLARRRRLELRRLGRTAPVGAEGEVAMRVRPVSG
TSADTSRESAKVAPEPHEGASAVAGWPKPVSHGAVSVIGRRREMEDAVAVAVPFLVAAAGEEGDGGGEKEAEMEFFAVYD
GHGGSRVADACRERLHVVLAEEVARLHLVKGGDGARWREVMEACFARVDGEVAVVEGEVNNAGHTVGSTAVVAVVGPRHI
VVANCGDSRAVLSRGGVPVPLSSDHKPDRPDELERVESAGGRVINWKGYRVLGVLATSRSIGDYYMKPFISAEPEVTVTE
RTHKDEFIILGSDGLWDVMSNEVACKVARNCLCGRAASKYPETVHGSSASDAAAVLVEFAMARGSTDNISVVVVELKRLK
WKGGRQNGRT

MSSSEASTQDHGVPALEAQDSTDDHGVPALEAPTPEATDKVLAAMARLARRRRLELRRLGRTAPVGAEGEVAMRVRPVSG
TSADTSRESAKVAPEPHEGASAVAGWPKPVSHGAVSVIGRRREMEDAVAVAVPFLVAAAGEEGDGGGEKEAEMEFFAVYD
GHGGSRVADACRERLHVVLAEEVARLHLVKGGDGARWREVMEACFARVDGEVAVVEGEVNNAGHTVGSTAVVAVVGPRHI
VVANCGDSRAVLSRGGVPVPLSSDHKPDRPDELERVESAGGRVINWKGYRVLGVLATSRSIGDYYMKPFISAEPEVTVTE
RTHKDEFIILGSDGLWDVMSNEVACKVARNCLCGRAASKYPETVHGSSASDAAAVLVEFAMARGSTDNISVVVVELKRLK
WKGGRQNGRT

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00481
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Nucleotide Sequence
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ACTTCTTTTGCGCTCCTTGCTTCCG...

GRMZM2G122228_T01 from maize genome v3


Related TFome: pUT6647

Amino Acid Sequence
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MSSSEASTQDHGVPALEAQDSTDDHGVPALEAPTPEATDKVLAAMARLARRRRLELRRLGRTAPVGAEGEVAMRVRPVSG
TSADTSRESAKVAPEPHEGASAVAGWPKPVSHGAVSVIGRRREMEDAVAVAVPFLVAAAGEEGDGGGEKEAEMEFFAVYD
GHGGSRVADACRERLHVVLAEEVARLHLVKGGDGARWREVMEACFARVDGEVAVVEGEVNNAGHTVGSTAVVAVVGPRHI
VVANCGDSRAVLSRGGVPVPLSSDHKPDRPDELERVESAGGRVINWKGYRVLGVLATSRSIGDYYMKPFISAEPEVTVTE
RTHKDEFIILGSDGLWDVMSNEVACKVARNCLCGRAASKYPETVHGSSASDAAAVLVEFAMARGSTDNISVVVVELKRLK
WKGGRQNGRT

Nucleotide Sequence
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ACTTCTTTTGCGCTCCTTGCTTCCG...

GRMZM2G122228_T02 from maize genome v3

Amino Acid Sequence
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MACRRSRRRIARMTMACPRSRRPRPRLRTRYWPPWRVDGEVAVVEGEVNNAGHTVGSTAVVAVVGPRHIVVANCGDSRAV
LSRGGVPVPLSSDHKPDRPDELERVESAGGRVINWKGYRVLGVLATSRSIGDYYMKPFISAEPEVTVTERTHKDEFIILG
SDGLWDVMSNEVACKVARNCLCGRAASKYPETVHGSSASDAAAVLVEFAMARGSTDNISVVVVELKRLKWKGGRQNGRT

Nucleotide Sequence
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CTTTTGCGCTCCTTGCTTCCGCTTG...

GRMZM2G122228_T03 from maize genome v3

Amino Acid Sequence
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MSSSEASTQDHGVPALEAQDSTDDHGVPALEAPTPEATDKVLAAMARLARRRRLELRRLGRTAPVGAEGEVAMRVRPVSG
TSADTSRESAKVAPEPHEGASAVAGWPKPVSHGAVSVIGRRREMEDAVAVAVPFLVAAAGEEGDGGGEKEAEMEFFAVYD
GHGGSRVADACRERLHVVLAEEVARLHLVKGGDGARWREVMEACFARVDGEVAVVEGEVNNAGHTVGSTAVVAVVGPRHI
VVANCGDSRAVLSRGGVPVPLSSDHKPDRPDELERVESAMPPRCWWSSPWRGAAPTTSASWWWS

Nucleotide Sequence
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ACTTCTTTTGCGCTCCTTGCTTCCG...

Zm00001d044015_T001 from maize genome v4

Amino Acid Sequence
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MSSSEASTQDHGVPALEAQDSTDDHGVPALEAPTPEATDKVLAAMARLARRRRLELRRLGRTAPVGAEGEVAMRVRPVSG
TSADTSRESAKVAPEPHEGASAVAGWPKPVSHGAVSVIGRRREMEDAVAVAVPFLVAAAGEEGDGGGEKEAEMEFFAVYD
GHGGSRVADACRERLHVVLAEEVARLHLVKGGDGARWREVMEACFARVDGEVAVVEGEVNNAGHTVGSTAVVAVVGPRHI
VVANCGDSRAVLSRGGVPVPLSSDHKPDRPDELERVESAGGRVINWKGYRVLGVLATSRSIGDYYMKPFISAEPEVTVTE
RTHKDEFIILGSDGLWDVMSNEVACKVARNCLCGRAASKYPETVHGSSASDAAAVLVEFAMARGSTDNISVVVVELKRLK
WKGGRQNGRT

Nucleotide Sequence
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ACTTCTTTTGCGCTCCTTGCTTCCG...

Zm00001eb158020_T002 from maize genome v5

Amino Acid Sequence
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MSSSEASTQDHGVPALEAQDSTDDHGVPALEAPTPEATDKVLAAMARLARRRRLELRRLGRTAPVGAEGEVAMRVRPVSG
TSADTSRESAKVAPEPHEGASAVAGWPKPVSHGAVSVIGRRREMEDAVAVAVPFLVAAAGEEGDGGGEKEAEMEFFAVYD
GHGGSRVADACRERLHVVLAEEVARLHLVKGGDGARWREVMEACFARVDGEVAVVEGEVNNAGHTVGSTAVVAVVGPRHI
VVANCGDSRAVLSRGGVPVPLSSDHKIGLMSWKG

Nucleotide Sequence
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ACTTCTTTTGCGCTCCTTGCTTCCG...

Zm00001eb158020_T003 from maize genome v5

Amino Acid Sequence
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MSSSEASTQDHGVPALEAQDSTDDHGVPALEAPTPEATDKVLAAMARLARRRRLELRRLGRTAPVGAEGEVAMRVRPVSG
TSADTSRESAKVAPEPHEGASAVAGWPKPVSHGAVSVIGRRREMEDAVAVAVPFLVAAAGEEGDGGGEKEAEMEFFAVYD
GHGGSRVADACRERLHVVLAEEVARLHLVKGGDGARWREVMEACFARVDGEVAVVEGEVNNAGHTVGSTAVVAVVGPRHI
VVANCGDSRAVLSRGGVPVPLSSDHKVLTSVQHPHYRALPPKTNSLLDLQSRGRRQADSSPSAPPRSALI

Nucleotide Sequence
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ACTTCTTTTGCGCTCCTTGCTTCCG...

Zm00001eb158020_T004 from maize genome v5

Amino Acid Sequence
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MSSSEASTQDHGVPALEAQDSTDDHGVPALEAPTPEATDKVLAAMARLARRRRLELRRLGRTAPVGAEGEVAMRVRPVSG
TSADTSRESAKVAPEPHEGASAVAGWPKPVSHGAVSVIGRRREMEDAVAVAVPFLVAAAGEEGDGGGEKEAEMEFFAVYD
GHGGSRVADACRERLHVVLAEEVARLHLVKGGDGARWREVMEACFARVDGEVAVVEGEVNNAGHTVGSTAVVAVVGPRHI
VVANCGDSRAVLSRGGVPVPLSSDHKVLTSVQHPHYRALPPKTNSLLDLQSRGRRQADSSPSAPPRSALI

Nucleotide Sequence
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ACTTCTTTTGCGCTCCTTGCTTCCG...


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